Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga2P52927 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga2P52927 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
Hmga2P52927 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga2P52927 Gm2559-201ENSMUST00000201323 363 ntBASIC14.3□□□□□ -0.12
Hmga2P52927 Gm4968-201ENSMUST00000071458 858 ntBASIC14.3□□□□□ -0.12
Hmga2P52927 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga2P52927 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga2P52927 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga2P52927 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga2P52927 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga2P52927 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hmga2P52927 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga2P52927 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga2P52927 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Hmga2P52927 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Hmga2P52927 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmga2P52927 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hmga2P52927 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hmga2P52927 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hmga2P52927 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.29□□□□□ -0.12
Hmga2P52927 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.29□□□□□ -0.12
Hmga2P52927 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.29□□□□□ -0.12
Hmga2P52927 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hmga2P52927 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.29□□□□□ -0.12
Hmga2P52927 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmga2P52927 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga2P52927 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Hmga2P52927 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga2P52927 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.28□□□□□ -0.12
Hmga2P52927 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga2P52927 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga2P52927 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga2P52927 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga2P52927 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.28□□□□□ -0.12
Hmga2P52927 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga2P52927 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga2P52927 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.28□□□□□ -0.12
Hmga2P52927 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.28□□□□□ -0.12
Hmga2P52927 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga2P52927 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Hmga2P52927 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.28□□□□□ -0.12
Hmga2P52927 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmga2P52927 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmga2P52927 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmga2P52927 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Hmga2P52927 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Hmga2P52927 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hmga2P52927 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga2P52927 Gm24841-201ENSMUST00000158676 357 ntBASIC14.27□□□□□ -0.13
Hmga2P52927 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.27□□□□□ -0.13
Hmga2P52927 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga2P52927 Gm18284-201ENSMUST00000172604 624 ntBASIC14.27□□□□□ -0.13
Hmga2P52927 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga2P52927 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hmga2P52927 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Hmga2P52927 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga2P52927 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Hmga2P52927 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga2P52927 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga2P52927 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Hmga2P52927 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga2P52927 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga2P52927 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Hmga2P52927 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga2P52927 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hmga2P52927 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.26□□□□□ -0.13
Hmga2P52927 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hmga2P52927 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.26□□□□□ -0.13
Hmga2P52927 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.26□□□□□ -0.13
Hmga2P52927 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hmga2P52927 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hmga2P52927 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms