Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ercc3P49135 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc3P49135 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc3P49135 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc3P49135 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.88■□□□□ 0.77
Ercc3P49135 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc3P49135 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc3P49135 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc3P49135 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc3P49135 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc3P49135 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc3P49135 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc3P49135 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.88■□□□□ 0.77
Ercc3P49135 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc3P49135 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc3P49135 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ercc3P49135 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ercc3P49135 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc3P49135 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc3P49135 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc3P49135 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc3P49135 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc3P49135 Phf7-203ENSMUST00000226565 1971 ntBASIC19.87■□□□□ 0.77
Ercc3P49135 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ercc3P49135 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.87■□□□□ 0.77
Ercc3P49135 Gm18101-201ENSMUST00000215769 548 ntBASIC19.87■□□□□ 0.77
Ercc3P49135 Gm21559-201ENSMUST00000220638 855 ntBASIC19.87■□□□□ 0.77
Ercc3P49135 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc3P49135 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ercc3P49135 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc3P49135 Gm8587-201ENSMUST00000076538 843 ntBASIC19.87■□□□□ 0.77
Ercc3P49135 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc3P49135 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc3P49135 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc3P49135 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ercc3P49135 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc3P49135 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ercc3P49135 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.86■□□□□ 0.77
Ercc3P49135 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ercc3P49135 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Gm6659-201ENSMUST00000174752 547 ntBASIC19.86■□□□□ 0.77
Ercc3P49135 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.86■□□□□ 0.77
Ercc3P49135 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.86■□□□□ 0.77
Ercc3P49135 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ercc3P49135 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ercc3P49135 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.86■□□□□ 0.77
Ercc3P49135 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ercc3P49135 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ercc3P49135 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ercc3P49135 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ercc3P49135 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ercc3P49135 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ercc3P49135 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Ercc3P49135 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Ercc3P49135 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ercc3P49135 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ercc3P49135 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ercc3P49135 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ercc3P49135 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ercc3P49135 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ercc3P49135 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ercc3P49135 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ercc3P49135 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Mir1668-201ENSMUST00000184114 107 ntBASIC19.84■□□□□ 0.77
Ercc3P49135 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.84■□□□□ 0.77
Ercc3P49135 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ercc3P49135 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms