Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh2P43247 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh2P43247 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh2P43247 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh2P43247 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Msh2P43247 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh2P43247 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.28■□□□□ 0.36
Msh2P43247 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh2P43247 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh2P43247 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Msh2P43247 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Msh2P43247 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh2P43247 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Msh2P43247 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Msh2P43247 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh2P43247 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh2P43247 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh2P43247 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.28■□□□□ 0.36
Msh2P43247 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Msh2P43247 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Msh2P43247 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Msh2P43247 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msh2P43247 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msh2P43247 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Msh2P43247 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msh2P43247 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msh2P43247 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.27■□□□□ 0.36
Msh2P43247 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Msh2P43247 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.27■□□□□ 0.36
Msh2P43247 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msh2P43247 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.27■□□□□ 0.36
Msh2P43247 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msh2P43247 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.27■□□□□ 0.36
Msh2P43247 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msh2P43247 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Msh2P43247 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Msh2P43247 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.27■□□□□ 0.36
Msh2P43247 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Msh2P43247 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Msh2P43247 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Msh2P43247 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Msh2P43247 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Msh2P43247 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Msh2P43247 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Msh2P43247 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Msh2P43247 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.26■□□□□ 0.35
Msh2P43247 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.26■□□□□ 0.35
Msh2P43247 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.26■□□□□ 0.35
Msh2P43247 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Msh2P43247 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Msh2P43247 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Msh2P43247 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Msh2P43247 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
Msh2P43247 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Msh2P43247 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh2P43247 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Msh2P43247 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh2P43247 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Msh2P43247 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Msh2P43247 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh2P43247 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Msh2P43247 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msh2P43247 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.25■□□□□ 0.35
Msh2P43247 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh2P43247 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh2P43247 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.25■□□□□ 0.35
Msh2P43247 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh2P43247 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Msh2P43247 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh2P43247 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh2P43247 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msh2P43247 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msh2P43247 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh2P43247 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.25■□□□□ 0.35
Msh2P43247 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Msh2P43247 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh2P43247 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh2P43247 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh2P43247 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh2P43247 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms