Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx2P43241 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdx2P43241 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx2P43241 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Cdx2P43241 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx2P43241 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx2P43241 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx2P43241 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx2P43241 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx2P43241 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx2P43241 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx2P43241 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx2P43241 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx2P43241 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cdx2P43241 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cdx2P43241 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx2P43241 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx2P43241 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx2P43241 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx2P43241 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.89■□□□□ 0.13
Cdx2P43241 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx2P43241 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.89■□□□□ 0.13
Cdx2P43241 Gm10060-201ENSMUST00000212002 111 ntBASIC15.89■□□□□ 0.13
Cdx2P43241 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.89■□□□□ 0.13
Cdx2P43241 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx2P43241 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Cdx2P43241 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
Cdx2P43241 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx2P43241 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.89■□□□□ 0.13
Cdx2P43241 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx2P43241 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx2P43241 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx2P43241 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.89■□□□□ 0.13
Cdx2P43241 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx2P43241 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Cdx2P43241 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx2P43241 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.89■□□□□ 0.13
Cdx2P43241 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx2P43241 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx2P43241 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx2P43241 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx2P43241 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx2P43241 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx2P43241 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.88■□□□□ 0.13
Cdx2P43241 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx2P43241 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.88■□□□□ 0.13
Cdx2P43241 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.88■□□□□ 0.13
Cdx2P43241 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx2P43241 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Cdx2P43241 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx2P43241 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Cdx2P43241 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.88■□□□□ 0.13
Cdx2P43241 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Cdx2P43241 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx2P43241 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx2P43241 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx2P43241 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx2P43241 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx2P43241 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.87■□□□□ 0.13
Cdx2P43241 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx2P43241 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx2P43241 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cdx2P43241 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx2P43241 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx2P43241 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Cdx2P43241 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.87■□□□□ 0.13
Cdx2P43241 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.87■□□□□ 0.13
Cdx2P43241 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cdx2P43241 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
Cdx2P43241 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.87■□□□□ 0.13
Cdx2P43241 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.87■□□□□ 0.13
Cdx2P43241 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.87■□□□□ 0.13
Cdx2P43241 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx2P43241 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Cdx2P43241 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx2P43241 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx2P43241 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx2P43241 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx2P43241 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx2P43241 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx2P43241 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.86■□□□□ 0.13
Cdx2P43241 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cdx2P43241 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx2P43241 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx2P43241 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx2P43241 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx2P43241 Gm12350-201ENSMUST00000121208 462 ntBASIC15.86■□□□□ 0.13
Cdx2P43241 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.86■□□□□ 0.13
Cdx2P43241 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx2P43241 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.86■□□□□ 0.13
Cdx2P43241 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.86■□□□□ 0.13
Cdx2P43241 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.86■□□□□ 0.13
Cdx2P43241 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx2P43241 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx2P43241 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx2P43241 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx2P43241 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.86■□□□□ 0.13
Cdx2P43241 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx2P43241 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Cdx2P43241 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms