Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LdlrP35951 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LdlrP35951 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LdlrP35951 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LdlrP35951 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LdlrP35951 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LdlrP35951 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LdlrP35951 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LdlrP35951 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LdlrP35951 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.68■□□□□ 0.26
LdlrP35951 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
LdlrP35951 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LdlrP35951 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.68■□□□□ 0.26
LdlrP35951 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LdlrP35951 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
LdlrP35951 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.67■□□□□ 0.26
LdlrP35951 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LdlrP35951 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LdlrP35951 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LdlrP35951 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LdlrP35951 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LdlrP35951 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.67■□□□□ 0.26
LdlrP35951 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.67■□□□□ 0.26
LdlrP35951 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LdlrP35951 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LdlrP35951 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LdlrP35951 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LdlrP35951 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LdlrP35951 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
LdlrP35951 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LdlrP35951 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LdlrP35951 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LdlrP35951 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LdlrP35951 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LdlrP35951 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LdlrP35951 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.67■□□□□ 0.26
LdlrP35951 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.67■□□□□ 0.26
LdlrP35951 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.66■□□□□ 0.26
LdlrP35951 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.66■□□□□ 0.26
LdlrP35951 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LdlrP35951 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LdlrP35951 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.66■□□□□ 0.26
LdlrP35951 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LdlrP35951 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
LdlrP35951 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.65■□□□□ 0.26
LdlrP35951 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LdlrP35951 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
LdlrP35951 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LdlrP35951 Gm21814-202ENSMUST00000203277 873 ntBASIC16.65■□□□□ 0.26
LdlrP35951 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.65■□□□□ 0.26
LdlrP35951 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms