Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nfkb1P25799 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nfkb1P25799 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.22■□□□□ 0.35
Nfkb1P25799 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.22■□□□□ 0.35
Nfkb1P25799 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.22■□□□□ 0.35
Nfkb1P25799 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nfkb1P25799 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nfkb1P25799 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nfkb1P25799 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nfkb1P25799 Gm45328-201ENSMUST00000210942 917 ntBASIC17.22■□□□□ 0.35
Nfkb1P25799 Gm18669-201ENSMUST00000216049 778 ntBASIC17.22■□□□□ 0.35
Nfkb1P25799 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nfkb1P25799 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nfkb1P25799 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Nfkb1P25799 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nfkb1P25799 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nfkb1P25799 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nfkb1P25799 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nfkb1P25799 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.21■□□□□ 0.35
Nfkb1P25799 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.21■□□□□ 0.35
Nfkb1P25799 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nfkb1P25799 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nfkb1P25799 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nfkb1P25799 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nfkb1P25799 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nfkb1P25799 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Nfkb1P25799 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nfkb1P25799 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nfkb1P25799 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nfkb1P25799 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nfkb1P25799 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nfkb1P25799 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nfkb1P25799 Mir3081-201ENSMUST00000175305 84 ntBASIC17.21■□□□□ 0.35
Nfkb1P25799 Gm17971-201ENSMUST00000190239 806 ntBASIC17.21■□□□□ 0.35
Nfkb1P25799 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nfkb1P25799 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nfkb1P25799 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.21■□□□□ 0.35
Nfkb1P25799 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nfkb1P25799 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nfkb1P25799 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Nfkb1P25799 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nfkb1P25799 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nfkb1P25799 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Nfkb1P25799 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nfkb1P25799 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nfkb1P25799 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Nfkb1P25799 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nfkb1P25799 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nfkb1P25799 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nfkb1P25799 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nfkb1P25799 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nfkb1P25799 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nfkb1P25799 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nfkb1P25799 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Nfkb1P25799 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.2■□□□□ 0.34
Nfkb1P25799 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.2■□□□□ 0.34
Nfkb1P25799 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nfkb1P25799 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Nfkb1P25799 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nfkb1P25799 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nfkb1P25799 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nfkb1P25799 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nfkb1P25799 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nfkb1P25799 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nfkb1P25799 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nfkb1P25799 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nfkb1P25799 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Nfkb1P25799 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nfkb1P25799 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.19■□□□□ 0.34
Nfkb1P25799 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nfkb1P25799 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nfkb1P25799 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nfkb1P25799 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.19■□□□□ 0.34
Nfkb1P25799 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Nfkb1P25799 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nfkb1P25799 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nfkb1P25799 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nfkb1P25799 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nfkb1P25799 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nfkb1P25799 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nfkb1P25799 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Nfkb1P25799 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nfkb1P25799 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nfkb1P25799 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nfkb1P25799 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Nfkb1P25799 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nfkb1P25799 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.18■□□□□ 0.34
Nfkb1P25799 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.18■□□□□ 0.34
Nfkb1P25799 Olfr129-201ENSMUST00000122318 993 ntBASIC17.18■□□□□ 0.34
Nfkb1P25799 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Gm27357-201ENSMUST00000183754 135 ntBASIC17.18■□□□□ 0.34
Nfkb1P25799 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nfkb1P25799 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms