Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Aldh1a1P24549 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Aldh1a1P24549 Gm2756-201ENSMUST00000195851 400 ntBASIC17.96■□□□□ 0.47
Aldh1a1P24549 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Aldh1a1P24549 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.96■□□□□ 0.47
Aldh1a1P24549 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aldh1a1P24549 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aldh1a1P24549 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Aldh1a1P24549 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Aldh1a1P24549 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aldh1a1P24549 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Aldh1a1P24549 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Aldh1a1P24549 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Aldh1a1P24549 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Aldh1a1P24549 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
Aldh1a1P24549 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.95■□□□□ 0.46
Aldh1a1P24549 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Gm11779-201ENSMUST00000118541 368 ntBASIC17.95■□□□□ 0.46
Aldh1a1P24549 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Psmb5-202ENSMUST00000227257 622 ntBASIC17.95■□□□□ 0.46
Aldh1a1P24549 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aldh1a1P24549 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.95■□□□□ 0.46
Aldh1a1P24549 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Aldh1a1P24549 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.94■□□□□ 0.46
Aldh1a1P24549 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Aldh1a1P24549 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Aldh1a1P24549 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Aldh1a1P24549 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aldh1a1P24549 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aldh1a1P24549 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aldh1a1P24549 Gm27702-201ENSMUST00000184512 56 ntBASIC17.93■□□□□ 0.46
Aldh1a1P24549 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Aldh1a1P24549 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aldh1a1P24549 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aldh1a1P24549 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aldh1a1P24549 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aldh1a1P24549 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aldh1a1P24549 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Aldh1a1P24549 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Aldh1a1P24549 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Gm7230-201ENSMUST00000173026 815 ntBASIC17.92■□□□□ 0.46
Aldh1a1P24549 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Aldh1a1P24549 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Aldh1a1P24549 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Aldh1a1P24549 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Aldh1a1P24549 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Aldh1a1P24549 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms