Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Prim1P20664 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.28■■□□□ 1
Prim1P20664 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Prim1P20664 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.28■■□□□ 1
Prim1P20664 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.27■■□□□ 1
Prim1P20664 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Prim1P20664 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.27■■□□□ 1
Prim1P20664 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC21.27■■□□□ 1
Prim1P20664 Gm19891-201ENSMUST00000189771 303 ntBASIC21.27■■□□□ 1
Prim1P20664 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Prim1P20664 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Prim1P20664 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC21.27■■□□□ 1
Prim1P20664 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Prim1P20664 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Prim1P20664 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Prim1P20664 Gm43338-201ENSMUST00000198617 2223 ntBASIC21.27■□□□□ 0.99
Prim1P20664 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Prim1P20664 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC21.26■□□□□ 0.99
Prim1P20664 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prim1P20664 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Prim1P20664 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prim1P20664 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.26■□□□□ 0.99
Prim1P20664 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC21.26■□□□□ 0.99
Prim1P20664 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC21.26■□□□□ 0.99
Prim1P20664 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Prim1P20664 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC21.26■□□□□ 0.99
Prim1P20664 Gm24589-201ENSMUST00000116692 94 ntBASIC21.26■□□□□ 0.99
Prim1P20664 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC21.26■□□□□ 0.99
Prim1P20664 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prim1P20664 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prim1P20664 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prim1P20664 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prim1P20664 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prim1P20664 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Prim1P20664 Gm43294-201ENSMUST00000202850 2490 ntBASIC21.26■□□□□ 0.99
Prim1P20664 Slc35b2-202ENSMUST00000223987 1766 ntBASIC21.25■□□□□ 0.99
Prim1P20664 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prim1P20664 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prim1P20664 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prim1P20664 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prim1P20664 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Prim1P20664 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Prim1P20664 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC21.25■□□□□ 0.99
Prim1P20664 Gm7153-201ENSMUST00000117092 455 ntBASIC21.25■□□□□ 0.99
Prim1P20664 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Prim1P20664 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC21.25■□□□□ 0.99
Prim1P20664 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC21.25■□□□□ 0.99
Prim1P20664 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Prim1P20664 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Prim1P20664 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prim1P20664 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Prim1P20664 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Prim1P20664 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Prim1P20664 Gm15442-201ENSMUST00000117905 1527 ntBASIC21.24■□□□□ 0.99
Prim1P20664 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Prim1P20664 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prim1P20664 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Prim1P20664 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prim1P20664 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.24■□□□□ 0.99
Prim1P20664 Gm12895-201ENSMUST00000122214 226 ntBASIC21.24■□□□□ 0.99
Prim1P20664 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Prim1P20664 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC21.24■□□□□ 0.99
Prim1P20664 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prim1P20664 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Prim1P20664 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prim1P20664 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.24■□□□□ 0.99
Prim1P20664 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Prim1P20664 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Prim1P20664 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prim1P20664 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prim1P20664 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prim1P20664 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prim1P20664 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prim1P20664 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prim1P20664 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Prim1P20664 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC21.23■□□□□ 0.99
Prim1P20664 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prim1P20664 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Prim1P20664 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
Prim1P20664 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.23■□□□□ 0.99
Prim1P20664 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prim1P20664 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prim1P20664 Gm7461-201ENSMUST00000058918 827 ntBASIC21.23■□□□□ 0.99
Prim1P20664 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Prim1P20664 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prim1P20664 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prim1P20664 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Prim1P20664 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prim1P20664 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prim1P20664 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prim1P20664 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prim1P20664 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.22■□□□□ 0.99
Prim1P20664 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC21.22■□□□□ 0.99
Prim1P20664 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Prim1P20664 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Prim1P20664 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Prim1P20664 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Prim1P20664 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prim1P20664 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Prim1P20664 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms