Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccl1P10146 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ccl1P10146 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccl1P10146 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccl1P10146 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccl1P10146 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.08□□□□□ -0.31
Ccl1P10146 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Ccl1P10146 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccl1P10146 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccl1P10146 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ccl1P10146 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Ccl1P10146 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ccl1P10146 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccl1P10146 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ccl1P10146 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccl1P10146 Nespas-201ENSMUST00000143738 1083 ntBASIC13.07□□□□□ -0.32
Ccl1P10146 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Gm6420-201ENSMUST00000193885 723 ntBASIC13.07□□□□□ -0.32
Ccl1P10146 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccl1P10146 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.07□□□□□ -0.32
Ccl1P10146 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccl1P10146 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccl1P10146 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccl1P10146 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ccl1P10146 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.06□□□□□ -0.32
Ccl1P10146 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Ccl1P10146 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Ccl1P10146 Gm13234-201ENSMUST00000120010 747 ntBASIC13.06□□□□□ -0.32
Ccl1P10146 Gm12821-201ENSMUST00000120022 600 ntBASIC13.06□□□□□ -0.32
Ccl1P10146 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ccl1P10146 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Ccl1P10146 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccl1P10146 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ccl1P10146 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Ccl1P10146 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl1P10146 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl1P10146 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccl1P10146 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms