Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sod1P08228 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sod1P08228 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sod1P08228 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sod1P08228 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.73■□□□□ 0.11
Sod1P08228 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.73■□□□□ 0.11
Sod1P08228 Gm18206-201ENSMUST00000207027 926 ntBASIC15.73■□□□□ 0.11
Sod1P08228 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sod1P08228 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sod1P08228 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sod1P08228 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.73■□□□□ 0.11
Sod1P08228 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sod1P08228 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.73■□□□□ 0.11
Sod1P08228 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Sod1P08228 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.72■□□□□ 0.11
Sod1P08228 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Sod1P08228 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Sod1P08228 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Mir5131-201ENSMUST00000175426 93 ntBASIC15.72■□□□□ 0.11
Sod1P08228 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.72■□□□□ 0.11
Sod1P08228 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.72■□□□□ 0.11
Sod1P08228 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Sod1P08228 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.72■□□□□ 0.11
Sod1P08228 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Sod1P08228 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sod1P08228 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.71■□□□□ 0.11
Sod1P08228 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Sod1P08228 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sod1P08228 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sod1P08228 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sod1P08228 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sod1P08228 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sod1P08228 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.71■□□□□ 0.11
Sod1P08228 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sod1P08228 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.71■□□□□ 0.11
Sod1P08228 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sod1P08228 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sod1P08228 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.71■□□□□ 0.11
Sod1P08228 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sod1P08228 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sod1P08228 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sod1P08228 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sod1P08228 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sod1P08228 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.71■□□□□ 0.1
Sod1P08228 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sod1P08228 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sod1P08228 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.7■□□□□ 0.1
Sod1P08228 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sod1P08228 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sod1P08228 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sod1P08228 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.7■□□□□ 0.1
Sod1P08228 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sod1P08228 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sod1P08228 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sod1P08228 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sod1P08228 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sod1P08228 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sod1P08228 Gm10060-201ENSMUST00000212002 111 ntBASIC15.7■□□□□ 0.1
Sod1P08228 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sod1P08228 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.7■□□□□ 0.1
Sod1P08228 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.7■□□□□ 0.1
Sod1P08228 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sod1P08228 Gm5867-201ENSMUST00000063197 592 ntBASIC15.7■□□□□ 0.1
Sod1P08228 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sod1P08228 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sod1P08228 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.7■□□□□ 0.1
Sod1P08228 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sod1P08228 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sod1P08228 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.7■□□□□ 0.1
Sod1P08228 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.7■□□□□ 0.1
Sod1P08228 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.69■□□□□ 0.1
Sod1P08228 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sod1P08228 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sod1P08228 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sod1P08228 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sod1P08228 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sod1P08228 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sod1P08228 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sod1P08228 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sod1P08228 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.69■□□□□ 0.1
Sod1P08228 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sod1P08228 Gm1401-201ENSMUST00000122048 772 ntBASIC15.69■□□□□ 0.1
Sod1P08228 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms