Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PrnpP04925 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.36■□□□□ 0.37
PrnpP04925 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.36■□□□□ 0.37
PrnpP04925 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PrnpP04925 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PrnpP04925 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.36■□□□□ 0.37
PrnpP04925 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PrnpP04925 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PrnpP04925 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PrnpP04925 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrnpP04925 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrnpP04925 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.35■□□□□ 0.37
PrnpP04925 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.35■□□□□ 0.37
PrnpP04925 Gm2651-201ENSMUST00000203560 838 ntBASIC17.35■□□□□ 0.37
PrnpP04925 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrnpP04925 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrnpP04925 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrnpP04925 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PrnpP04925 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PrnpP04925 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrnpP04925 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrnpP04925 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PrnpP04925 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.35■□□□□ 0.37
PrnpP04925 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PrnpP04925 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PrnpP04925 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PrnpP04925 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.34■□□□□ 0.37
PrnpP04925 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PrnpP04925 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.34■□□□□ 0.37
PrnpP04925 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PrnpP04925 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PrnpP04925 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PrnpP04925 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.34■□□□□ 0.37
PrnpP04925 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PrnpP04925 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PrnpP04925 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PrnpP04925 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PrnpP04925 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PrnpP04925 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PrnpP04925 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PrnpP04925 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PrnpP04925 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
PrnpP04925 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PrnpP04925 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PrnpP04925 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PrnpP04925 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PrnpP04925 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PrnpP04925 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PrnpP04925 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PrnpP04925 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PrnpP04925 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrnpP04925 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.33■□□□□ 0.36
PrnpP04925 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.33■□□□□ 0.36
PrnpP04925 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.33■□□□□ 0.36
PrnpP04925 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PrnpP04925 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.33■□□□□ 0.36
PrnpP04925 Gm18206-201ENSMUST00000207027 926 ntBASIC17.33■□□□□ 0.36
PrnpP04925 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.33■□□□□ 0.36
PrnpP04925 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.33■□□□□ 0.36
PrnpP04925 Gm6296-201ENSMUST00000222599 943 ntBASIC17.33■□□□□ 0.36
PrnpP04925 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrnpP04925 Gm5867-201ENSMUST00000063197 592 ntBASIC17.33■□□□□ 0.36
PrnpP04925 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrnpP04925 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrnpP04925 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrnpP04925 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrnpP04925 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PrnpP04925 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PrnpP04925 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrnpP04925 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PrnpP04925 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PrnpP04925 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrnpP04925 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.32■□□□□ 0.36
PrnpP04925 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrnpP04925 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PrnpP04925 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrnpP04925 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PrnpP04925 Gm7862-201ENSMUST00000121461 292 ntBASIC17.32■□□□□ 0.36
PrnpP04925 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.32■□□□□ 0.36
PrnpP04925 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms