Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm6576-201ENSMUST00000169678 883 ntBASIC14.05□□□□□ -0.16
CfdP03953 Mir6349-201ENSMUST00000184059 97 ntBASIC14.05□□□□□ -0.16
CfdP03953 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.05□□□□□ -0.16
CfdP03953 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CfdP03953 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CfdP03953 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CfdP03953 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CfdP03953 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CfdP03953 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CfdP03953 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CfdP03953 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.05□□□□□ -0.16
CfdP03953 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CfdP03953 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CfdP03953 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CfdP03953 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CfdP03953 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CfdP03953 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.05□□□□□ -0.16
CfdP03953 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
CfdP03953 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CfdP03953 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CfdP03953 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CfdP03953 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CfdP03953 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CfdP03953 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CfdP03953 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.04□□□□□ -0.16
CfdP03953 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.04□□□□□ -0.16
CfdP03953 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CfdP03953 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.04□□□□□ -0.16
CfdP03953 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CfdP03953 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CfdP03953 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.04□□□□□ -0.16
CfdP03953 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.04□□□□□ -0.16
CfdP03953 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CfdP03953 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CfdP03953 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CfdP03953 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CfdP03953 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CfdP03953 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.03□□□□□ -0.16
CfdP03953 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.03□□□□□ -0.16
CfdP03953 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CfdP03953 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.03□□□□□ -0.16
CfdP03953 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CfdP03953 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CfdP03953 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.02□□□□□ -0.16
CfdP03953 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CfdP03953 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CfdP03953 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CfdP03953 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CfdP03953 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CfdP03953 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CfdP03953 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CfdP03953 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CfdP03953 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.02□□□□□ -0.16
CfdP03953 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CfdP03953 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CfdP03953 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CfdP03953 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.02□□□□□ -0.16
CfdP03953 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CfdP03953 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CfdP03953 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CfdP03953 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.02□□□□□ -0.17
CfdP03953 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CfdP03953 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.02□□□□□ -0.17
CfdP03953 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CfdP03953 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms