Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15□□□□□ -0.01
Hdac3O88895 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hdac3O88895 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hdac3O88895 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hdac3O88895 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hdac3O88895 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hdac3O88895 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15□□□□□ -0.01
Hdac3O88895 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hdac3O88895 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hdac3O88895 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hdac3O88895 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Hdac3O88895 AC153881.1-201ENSMUST00000214448 284 ntBASIC15□□□□□ -0.01
Hdac3O88895 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hdac3O88895 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Hdac3O88895 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hdac3O88895 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hdac3O88895 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hdac3O88895 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Hdac3O88895 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hdac3O88895 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Hdac3O88895 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Hdac3O88895 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hdac3O88895 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hdac3O88895 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hdac3O88895 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hdac3O88895 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hdac3O88895 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hdac3O88895 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Hdac3O88895 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Hdac3O88895 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hdac3O88895 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hdac3O88895 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hdac3O88895 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.99□□□□□ -0.01
Hdac3O88895 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Hdac3O88895 Gm27011-201ENSMUST00000182352 972 ntBASIC14.99□□□□□ -0.01
Hdac3O88895 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hdac3O88895 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hdac3O88895 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hdac3O88895 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hdac3O88895 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hdac3O88895 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Hdac3O88895 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.98□□□□□ -0.01
Hdac3O88895 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 Gm24841-201ENSMUST00000158676 357 ntBASIC14.98□□□□□ -0.01
Hdac3O88895 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.98□□□□□ -0.01
Hdac3O88895 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.98□□□□□ -0.01
Hdac3O88895 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 Gm10812-201ENSMUST00000099864 546 ntBASIC14.98□□□□□ -0.01
Hdac3O88895 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Hdac3O88895 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Hdac3O88895 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.98□□□□□ -0.01
Hdac3O88895 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Hdac3O88895 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.97□□□□□ -0.01
Hdac3O88895 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac3O88895 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.97□□□□□ -0.01
Hdac3O88895 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Hdac3O88895 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac3O88895 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac3O88895 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Hdac3O88895 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac3O88895 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac3O88895 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac3O88895 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac3O88895 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.97□□□□□ -0.01
Hdac3O88895 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Hdac3O88895 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.97□□□□□ -0.01
Hdac3O88895 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.97□□□□□ -0.01
Hdac3O88895 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac3O88895 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac3O88895 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Hdac3O88895 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac3O88895 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac3O88895 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac3O88895 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Hdac3O88895 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Hdac3O88895 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac3O88895 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac3O88895 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac3O88895 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac3O88895 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac3O88895 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac3O88895 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac3O88895 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Hdac3O88895 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac3O88895 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.96□□□□□ -0.01
Hdac3O88895 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hdac3O88895 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms