Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClppO88696 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClppO88696 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ClppO88696 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
ClppO88696 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClppO88696 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClppO88696 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ClppO88696 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClppO88696 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClppO88696 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClppO88696 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClppO88696 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClppO88696 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClppO88696 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClppO88696 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.33■□□□□ 0.21
ClppO88696 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
ClppO88696 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
ClppO88696 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClppO88696 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ClppO88696 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ClppO88696 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClppO88696 Gm7370-201ENSMUST00000219471 767 ntBASIC16.33■□□□□ 0.2
ClppO88696 Gm21559-201ENSMUST00000220638 855 ntBASIC16.33■□□□□ 0.2
ClppO88696 Gm8587-201ENSMUST00000076538 843 ntBASIC16.33■□□□□ 0.2
ClppO88696 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ClppO88696 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClppO88696 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.33■□□□□ 0.2
ClppO88696 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClppO88696 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ClppO88696 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ClppO88696 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
ClppO88696 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ClppO88696 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ClppO88696 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClppO88696 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClppO88696 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClppO88696 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClppO88696 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ClppO88696 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ClppO88696 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ClppO88696 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClppO88696 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.32■□□□□ 0.2
ClppO88696 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ClppO88696 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.32■□□□□ 0.2
ClppO88696 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClppO88696 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ClppO88696 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ClppO88696 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ClppO88696 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ClppO88696 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
ClppO88696 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.31■□□□□ 0.2
ClppO88696 Gm5587-201ENSMUST00000206270 674 ntBASIC16.31■□□□□ 0.2
ClppO88696 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.31■□□□□ 0.2
ClppO88696 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.31■□□□□ 0.2
ClppO88696 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
ClppO88696 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ClppO88696 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
ClppO88696 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClppO88696 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClppO88696 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.3■□□□□ 0.2
ClppO88696 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClppO88696 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClppO88696 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClppO88696 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClppO88696 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClppO88696 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ClppO88696 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.3■□□□□ 0.2
ClppO88696 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ClppO88696 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ClppO88696 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClppO88696 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ClppO88696 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.3■□□□□ 0.2
ClppO88696 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ClppO88696 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.3■□□□□ 0.2
ClppO88696 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClppO88696 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ClppO88696 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClppO88696 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ClppO88696 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClppO88696 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.3■□□□□ 0.2
ClppO88696 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClppO88696 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ClppO88696 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ClppO88696 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms