Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops3O88543 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cops3O88543 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cops3O88543 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cops3O88543 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cops3O88543 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cops3O88543 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops3O88543 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops3O88543 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cops3O88543 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops3O88543 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cops3O88543 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cops3O88543 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.04■□□□□ -0
Cops3O88543 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.04■□□□□ -0
Cops3O88543 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops3O88543 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cops3O88543 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cops3O88543 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops3O88543 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops3O88543 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cops3O88543 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.03■□□□□ -0
Cops3O88543 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.03■□□□□ -0
Cops3O88543 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Cops3O88543 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.03■□□□□ -0
Cops3O88543 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 Gm12382-201ENSMUST00000122005 922 ntBASIC15.03■□□□□ -0
Cops3O88543 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.03■□□□□ -0
Cops3O88543 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cops3O88543 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops3O88543 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cops3O88543 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops3O88543 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops3O88543 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops3O88543 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cops3O88543 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops3O88543 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Cops3O88543 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cops3O88543 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cops3O88543 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cops3O88543 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.02■□□□□ -0
Cops3O88543 Gm24841-201ENSMUST00000158676 357 ntBASIC15.02■□□□□ -0
Cops3O88543 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cops3O88543 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cops3O88543 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Cops3O88543 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops3O88543 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cops3O88543 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops3O88543 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops3O88543 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops3O88543 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops3O88543 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops3O88543 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops3O88543 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops3O88543 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Cops3O88543 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cops3O88543 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cops3O88543 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.01□□□□□ -0.01
Cops3O88543 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cops3O88543 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.01□□□□□ -0.01
Cops3O88543 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cops3O88543 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.01□□□□□ -0.01
Cops3O88543 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.01□□□□□ -0.01
Cops3O88543 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.01□□□□□ -0.01
Cops3O88543 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cops3O88543 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cops3O88543 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms