Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tgfbr3O88393 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.91■□□□□ 0.14
Tgfbr3O88393 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.91■□□□□ 0.14
Tgfbr3O88393 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.91■□□□□ 0.14
Tgfbr3O88393 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tgfbr3O88393 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tgfbr3O88393 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tgfbr3O88393 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tgfbr3O88393 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tgfbr3O88393 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tgfbr3O88393 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tgfbr3O88393 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Tgfbr3O88393 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tgfbr3O88393 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tgfbr3O88393 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tgfbr3O88393 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.91■□□□□ 0.14
Tgfbr3O88393 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tgfbr3O88393 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tgfbr3O88393 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tgfbr3O88393 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tgfbr3O88393 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.9■□□□□ 0.14
Tgfbr3O88393 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.9■□□□□ 0.14
Tgfbr3O88393 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.9■□□□□ 0.14
Tgfbr3O88393 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Tgfbr3O88393 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.9■□□□□ 0.14
Tgfbr3O88393 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tgfbr3O88393 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.9■□□□□ 0.14
Tgfbr3O88393 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tgfbr3O88393 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tgfbr3O88393 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tgfbr3O88393 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Tgfbr3O88393 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Gm27525-201ENSMUST00000184465 107 ntBASIC15.89■□□□□ 0.13
Tgfbr3O88393 Gm27867-201ENSMUST00000184778 125 ntBASIC15.89■□□□□ 0.13
Tgfbr3O88393 Gm18206-201ENSMUST00000207027 926 ntBASIC15.89■□□□□ 0.13
Tgfbr3O88393 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.89■□□□□ 0.13
Tgfbr3O88393 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tgfbr3O88393 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tgfbr3O88393 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tgfbr3O88393 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Gm2651-201ENSMUST00000203560 838 ntBASIC15.88■□□□□ 0.13
Tgfbr3O88393 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.88■□□□□ 0.13
Tgfbr3O88393 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Tgfbr3O88393 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tgfbr3O88393 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tgfbr3O88393 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tgfbr3O88393 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tgfbr3O88393 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Tgfbr3O88393 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.87■□□□□ 0.13
Tgfbr3O88393 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tgfbr3O88393 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tgfbr3O88393 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Tgfbr3O88393 Gm6376-201ENSMUST00000209407 580 ntBASIC15.87■□□□□ 0.13
Tgfbr3O88393 Gm6296-201ENSMUST00000222599 943 ntBASIC15.87■□□□□ 0.13
Tgfbr3O88393 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tgfbr3O88393 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tgfbr3O88393 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tgfbr3O88393 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tgfbr3O88393 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tgfbr3O88393 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Tgfbr3O88393 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tgfbr3O88393 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Tgfbr3O88393 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tgfbr3O88393 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Tgfbr3O88393 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Tgfbr3O88393 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms