Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rpl35aO55142 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.5□□□□□ -0.41
Rpl35aO55142 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.5□□□□□ -0.41
Rpl35aO55142 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rpl35aO55142 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rpl35aO55142 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpl35aO55142 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl35aO55142 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rpl35aO55142 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl35aO55142 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rpl35aO55142 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl35aO55142 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Rpl35aO55142 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl35aO55142 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl35aO55142 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rpl35aO55142 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl35aO55142 Gm13474-201ENSMUST00000122466 815 ntBASIC12.49□□□□□ -0.41
Rpl35aO55142 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl35aO55142 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.49□□□□□ -0.41
Rpl35aO55142 Gm22697-201ENSMUST00000175194 63 ntBASIC12.49□□□□□ -0.41
Rpl35aO55142 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl35aO55142 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.49□□□□□ -0.41
Rpl35aO55142 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rpl35aO55142 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl35aO55142 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.49□□□□□ -0.41
Rpl35aO55142 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl35aO55142 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Rpl35aO55142 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.49□□□□□ -0.41
Rpl35aO55142 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl35aO55142 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Rpl35aO55142 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl35aO55142 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl35aO55142 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpl35aO55142 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rpl35aO55142 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Rpl35aO55142 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rpl35aO55142 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rpl35aO55142 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Gm7977-201ENSMUST00000193787 748 ntBASIC12.48□□□□□ -0.41
Rpl35aO55142 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.48□□□□□ -0.41
Rpl35aO55142 Gm18101-201ENSMUST00000215769 548 ntBASIC12.48□□□□□ -0.41
Rpl35aO55142 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.48□□□□□ -0.41
Rpl35aO55142 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Rpl35aO55142 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rpl35aO55142 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpl35aO55142 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Rpl35aO55142 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rpl35aO55142 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.47□□□□□ -0.41
Rpl35aO55142 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rpl35aO55142 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.47□□□□□ -0.41
Rpl35aO55142 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.47□□□□□ -0.41
Rpl35aO55142 Gm8969-201ENSMUST00000199694 526 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms