Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Copb2O55029 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Copb2O55029 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Copb2O55029 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Copb2O55029 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Copb2O55029 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Copb2O55029 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Copb2O55029 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.25■□□□□ 0.67
Copb2O55029 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Copb2O55029 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.25■□□□□ 0.67
Copb2O55029 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.25■□□□□ 0.67
Copb2O55029 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.25■□□□□ 0.67
Copb2O55029 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Copb2O55029 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.25■□□□□ 0.67
Copb2O55029 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Copb2O55029 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.25■□□□□ 0.67
Copb2O55029 Gm18115-201ENSMUST00000221209 621 ntBASIC19.25■□□□□ 0.67
Copb2O55029 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Copb2O55029 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Copb2O55029 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Copb2O55029 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Copb2O55029 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Copb2O55029 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.24■□□□□ 0.67
Copb2O55029 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Copb2O55029 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Copb2O55029 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Copb2O55029 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Copb2O55029 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.24■□□□□ 0.67
Copb2O55029 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Copb2O55029 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Copb2O55029 Gm44450-201ENSMUST00000199528 114 ntBASIC19.24■□□□□ 0.67
Copb2O55029 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.24■□□□□ 0.67
Copb2O55029 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Copb2O55029 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.24■□□□□ 0.67
Copb2O55029 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Copb2O55029 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.24■□□□□ 0.67
Copb2O55029 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Copb2O55029 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Copb2O55029 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Copb2O55029 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Copb2O55029 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Copb2O55029 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Copb2O55029 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Copb2O55029 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Copb2O55029 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Copb2O55029 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Copb2O55029 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Copb2O55029 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Copb2O55029 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Copb2O55029 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Copb2O55029 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.23■□□□□ 0.67
Copb2O55029 Gm27357-201ENSMUST00000183754 135 ntBASIC19.23■□□□□ 0.67
Copb2O55029 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Copb2O55029 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Copb2O55029 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Copb2O55029 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Copb2O55029 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Copb2O55029 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Copb2O55029 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Copb2O55029 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Copb2O55029 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Copb2O55029 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Copb2O55029 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Copb2O55029 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Copb2O55029 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Copb2O55029 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Copb2O55029 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Copb2O55029 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Copb2O55029 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Copb2O55029 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Copb2O55029 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Copb2O55029 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Copb2O55029 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Copb2O55029 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.21■□□□□ 0.67
Copb2O55029 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.21■□□□□ 0.67
Copb2O55029 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Copb2O55029 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Copb2O55029 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Copb2O55029 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.2■□□□□ 0.66
Copb2O55029 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Copb2O55029 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Copb2O55029 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Copb2O55029 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Copb2O55029 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.2■□□□□ 0.66
Copb2O55029 Gm18421-201ENSMUST00000204122 625 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms