Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarce1O54941 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarce1O54941 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarce1O54941 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarce1O54941 Gm12527-201ENSMUST00000117967 564 ntBASIC19.94■□□□□ 0.78
Smarce1O54941 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.94■□□□□ 0.78
Smarce1O54941 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarce1O54941 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Smarce1O54941 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Smarce1O54941 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.94■□□□□ 0.78
Smarce1O54941 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarce1O54941 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarce1O54941 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.94■□□□□ 0.78
Smarce1O54941 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarce1O54941 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarce1O54941 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarce1O54941 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarce1O54941 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarce1O54941 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarce1O54941 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smarce1O54941 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarce1O54941 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Smarce1O54941 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarce1O54941 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarce1O54941 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Smarce1O54941 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.93■□□□□ 0.78
Smarce1O54941 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smarce1O54941 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Smarce1O54941 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Smarce1O54941 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.93■□□□□ 0.78
Smarce1O54941 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarce1O54941 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarce1O54941 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarce1O54941 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarce1O54941 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Smarce1O54941 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Smarce1O54941 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smarce1O54941 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smarce1O54941 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarce1O54941 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarce1O54941 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarce1O54941 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Smarce1O54941 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarce1O54941 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.92■□□□□ 0.78
Smarce1O54941 Gm27000-201ENSMUST00000182943 842 ntBASIC19.92■□□□□ 0.78
Smarce1O54941 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.92■□□□□ 0.78
Smarce1O54941 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarce1O54941 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarce1O54941 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarce1O54941 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarce1O54941 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarce1O54941 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.92■□□□□ 0.78
Smarce1O54941 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarce1O54941 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarce1O54941 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smarce1O54941 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smarce1O54941 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Smarce1O54941 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarce1O54941 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarce1O54941 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
Smarce1O54941 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarce1O54941 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarce1O54941 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.91■□□□□ 0.78
Smarce1O54941 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.91■□□□□ 0.78
Smarce1O54941 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarce1O54941 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Smarce1O54941 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarce1O54941 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.91■□□□□ 0.78
Smarce1O54941 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarce1O54941 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarce1O54941 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarce1O54941 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.91■□□□□ 0.78
Smarce1O54941 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.91■□□□□ 0.78
Smarce1O54941 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Smarce1O54941 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Smarce1O54941 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.9■□□□□ 0.78
Smarce1O54941 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.9■□□□□ 0.78
Smarce1O54941 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarce1O54941 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smarce1O54941 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarce1O54941 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.89■□□□□ 0.77
Smarce1O54941 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Smarce1O54941 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smarce1O54941 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarce1O54941 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms