Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Sdc4O35988 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Sdc4O35988 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc4O35988 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc4O35988 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc4O35988 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.27■□□□□ 0.36
Sdc4O35988 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc4O35988 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc4O35988 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc4O35988 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.27■□□□□ 0.36
Sdc4O35988 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.27■□□□□ 0.36
Sdc4O35988 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.27■□□□□ 0.36
Sdc4O35988 Gm17807-201ENSMUST00000186869 298 ntBASIC17.27■□□□□ 0.36
Sdc4O35988 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.27■□□□□ 0.36
Sdc4O35988 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc4O35988 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc4O35988 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc4O35988 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc4O35988 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sdc4O35988 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc4O35988 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc4O35988 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Sdc4O35988 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc4O35988 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc4O35988 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc4O35988 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sdc4O35988 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Sdc4O35988 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.26■□□□□ 0.35
Sdc4O35988 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.26■□□□□ 0.35
Sdc4O35988 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sdc4O35988 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.26■□□□□ 0.35
Sdc4O35988 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.26■□□□□ 0.35
Sdc4O35988 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sdc4O35988 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.26■□□□□ 0.35
Sdc4O35988 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sdc4O35988 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sdc4O35988 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.25■□□□□ 0.35
Sdc4O35988 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Sdc4O35988 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.25■□□□□ 0.35
Sdc4O35988 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Sdc4O35988 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sdc4O35988 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sdc4O35988 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.24■□□□□ 0.35
Sdc4O35988 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc4O35988 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc4O35988 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc4O35988 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.24■□□□□ 0.35
Sdc4O35988 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc4O35988 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc4O35988 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.24■□□□□ 0.35
Sdc4O35988 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc4O35988 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc4O35988 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc4O35988 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc4O35988 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Sdc4O35988 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc4O35988 Gm27742-201ENSMUST00000184667 60 ntBASIC17.24■□□□□ 0.35
Sdc4O35988 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.24■□□□□ 0.35
Sdc4O35988 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc4O35988 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc4O35988 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc4O35988 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc4O35988 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sdc4O35988 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms