Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sptlc1O35704 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sptlc1O35704 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sptlc1O35704 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sptlc1O35704 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sptlc1O35704 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sptlc1O35704 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Sptlc1O35704 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sptlc1O35704 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sptlc1O35704 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.31■□□□□ 0.52
Sptlc1O35704 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sptlc1O35704 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.31■□□□□ 0.52
Sptlc1O35704 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sptlc1O35704 Gm44771-201ENSMUST00000206975 626 ntBASIC18.31■□□□□ 0.52
Sptlc1O35704 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Sptlc1O35704 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Sptlc1O35704 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.31■□□□□ 0.52
Sptlc1O35704 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sptlc1O35704 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sptlc1O35704 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.3■□□□□ 0.52
Sptlc1O35704 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sptlc1O35704 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sptlc1O35704 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.3■□□□□ 0.52
Sptlc1O35704 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.3■□□□□ 0.52
Sptlc1O35704 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sptlc1O35704 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.3■□□□□ 0.52
Sptlc1O35704 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sptlc1O35704 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.3■□□□□ 0.52
Sptlc1O35704 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Sptlc1O35704 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.3■□□□□ 0.52
Sptlc1O35704 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.3■□□□□ 0.52
Sptlc1O35704 Gm8969-201ENSMUST00000199694 526 ntBASIC18.3■□□□□ 0.52
Sptlc1O35704 Mzt1-203ENSMUST00000227948 952 ntBASIC18.3■□□□□ 0.52
Sptlc1O35704 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sptlc1O35704 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sptlc1O35704 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sptlc1O35704 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sptlc1O35704 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sptlc1O35704 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptlc1O35704 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sptlc1O35704 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptlc1O35704 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptlc1O35704 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sptlc1O35704 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptlc1O35704 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptlc1O35704 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptlc1O35704 Gm6754-201ENSMUST00000117124 913 ntBASIC18.29■□□□□ 0.52
Sptlc1O35704 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sptlc1O35704 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.29■□□□□ 0.52
Sptlc1O35704 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.29■□□□□ 0.52
Sptlc1O35704 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.29■□□□□ 0.52
Sptlc1O35704 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptlc1O35704 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptlc1O35704 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.29■□□□□ 0.52
Sptlc1O35704 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sptlc1O35704 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sptlc1O35704 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Sptlc1O35704 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptlc1O35704 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptlc1O35704 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Sptlc1O35704 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.28■□□□□ 0.52
Sptlc1O35704 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC18.28■□□□□ 0.52
Sptlc1O35704 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.28■□□□□ 0.52
Sptlc1O35704 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sptlc1O35704 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.28■□□□□ 0.52
Sptlc1O35704 Gm43347-201ENSMUST00000200226 580 ntBASIC18.28■□□□□ 0.52
Sptlc1O35704 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.28■□□□□ 0.52
Sptlc1O35704 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sptlc1O35704 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptlc1O35704 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.28■□□□□ 0.52
Sptlc1O35704 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptlc1O35704 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sptlc1O35704 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptlc1O35704 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.27■□□□□ 0.52
Sptlc1O35704 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sptlc1O35704 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptlc1O35704 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptlc1O35704 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.27■□□□□ 0.52
Sptlc1O35704 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
Sptlc1O35704 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptlc1O35704 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.27■□□□□ 0.52
Sptlc1O35704 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sptlc1O35704 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Sptlc1O35704 Gm28196-201ENSMUST00000187719 640 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms