Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ptch2O35595 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptch2O35595 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptch2O35595 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Ptch2O35595 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptch2O35595 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptch2O35595 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptch2O35595 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptch2O35595 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptch2O35595 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptch2O35595 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Ptch2O35595 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptch2O35595 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptch2O35595 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptch2O35595 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptch2O35595 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ptch2O35595 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ptch2O35595 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ptch2O35595 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ptch2O35595 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Ptch2O35595 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.16■□□□□ 0.34
Ptch2O35595 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.16■□□□□ 0.34
Ptch2O35595 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ptch2O35595 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ptch2O35595 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ptch2O35595 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Ptch2O35595 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptch2O35595 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ptch2O35595 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptch2O35595 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ptch2O35595 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.15■□□□□ 0.34
Ptch2O35595 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptch2O35595 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptch2O35595 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptch2O35595 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptch2O35595 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ptch2O35595 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.15■□□□□ 0.34
Ptch2O35595 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptch2O35595 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ptch2O35595 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ptch2O35595 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptch2O35595 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptch2O35595 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptch2O35595 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptch2O35595 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptch2O35595 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptch2O35595 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ptch2O35595 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ptch2O35595 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.14■□□□□ 0.33
Ptch2O35595 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ptch2O35595 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.14■□□□□ 0.33
Ptch2O35595 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Ptch2O35595 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptch2O35595 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptch2O35595 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptch2O35595 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.14■□□□□ 0.33
Ptch2O35595 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ptch2O35595 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptch2O35595 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ptch2O35595 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ptch2O35595 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ptch2O35595 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptch2O35595 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ptch2O35595 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ptch2O35595 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptch2O35595 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ptch2O35595 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptch2O35595 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.13■□□□□ 0.33
Ptch2O35595 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.13■□□□□ 0.33
Ptch2O35595 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Ptch2O35595 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.13■□□□□ 0.33
Ptch2O35595 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.13■□□□□ 0.33
Ptch2O35595 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ptch2O35595 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ptch2O35595 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptch2O35595 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ptch2O35595 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ptch2O35595 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ptch2O35595 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ptch2O35595 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Ptch2O35595 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ptch2O35595 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ptch2O35595 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ptch2O35595 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms