Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Gm27000-201ENSMUST00000182943 842 ntBASIC15.76■□□□□ 0.11
Cx3cl1O35188 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cx3cl1O35188 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cx3cl1O35188 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.74■□□□□ 0.11
Cx3cl1O35188 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.74■□□□□ 0.11
Cx3cl1O35188 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.74■□□□□ 0.11
Cx3cl1O35188 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.74■□□□□ 0.11
Cx3cl1O35188 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.74■□□□□ 0.11
Cx3cl1O35188 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Cx3cl1O35188 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cx3cl1O35188 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cx3cl1O35188 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cx3cl1O35188 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cx3cl1O35188 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cx3cl1O35188 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cx3cl1O35188 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.73■□□□□ 0.11
Cx3cl1O35188 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.73■□□□□ 0.11
Cx3cl1O35188 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cx3cl1O35188 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cx3cl1O35188 Gm7213-201ENSMUST00000215977 950 ntBASIC15.73■□□□□ 0.11
Cx3cl1O35188 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cx3cl1O35188 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cx3cl1O35188 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cx3cl1O35188 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cx3cl1O35188 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.73■□□□□ 0.11
Cx3cl1O35188 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cx3cl1O35188 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Mir1668-201ENSMUST00000184114 107 ntBASIC15.72■□□□□ 0.11
Cx3cl1O35188 Gm18032-201ENSMUST00000222541 538 ntBASIC15.72■□□□□ 0.11
Cx3cl1O35188 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cx3cl1O35188 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms