Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac1O09106 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac1O09106 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac1O09106 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hdac1O09106 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac1O09106 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac1O09106 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac1O09106 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac1O09106 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac1O09106 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac1O09106 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac1O09106 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Hdac1O09106 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Hdac1O09106 Gm12441-201ENSMUST00000121806 588 ntBASIC19.97■□□□□ 0.79
Hdac1O09106 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.97■□□□□ 0.79
Hdac1O09106 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.97■□□□□ 0.79
Hdac1O09106 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac1O09106 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac1O09106 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.97■□□□□ 0.79
Hdac1O09106 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac1O09106 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac1O09106 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac1O09106 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.97■□□□□ 0.79
Hdac1O09106 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac1O09106 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac1O09106 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hdac1O09106 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac1O09106 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac1O09106 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac1O09106 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac1O09106 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac1O09106 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac1O09106 Gm12527-201ENSMUST00000117967 564 ntBASIC19.96■□□□□ 0.79
Hdac1O09106 Gm7638-201ENSMUST00000121348 967 ntBASIC19.96■□□□□ 0.79
Hdac1O09106 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.96■□□□□ 0.79
Hdac1O09106 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac1O09106 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.96■□□□□ 0.79
Hdac1O09106 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Hdac1O09106 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac1O09106 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac1O09106 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac1O09106 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac1O09106 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac1O09106 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Hdac1O09106 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac1O09106 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac1O09106 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hdac1O09106 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Hdac1O09106 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac1O09106 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac1O09106 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.95■□□□□ 0.78
Hdac1O09106 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac1O09106 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac1O09106 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.95■□□□□ 0.78
Hdac1O09106 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.95■□□□□ 0.78
Hdac1O09106 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Hdac1O09106 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Hdac1O09106 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac1O09106 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac1O09106 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.95■□□□□ 0.78
Hdac1O09106 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
Hdac1O09106 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac1O09106 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Hdac1O09106 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac1O09106 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac1O09106 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac1O09106 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.95■□□□□ 0.78
Hdac1O09106 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac1O09106 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac1O09106 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Hdac1O09106 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hdac1O09106 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.94■□□□□ 0.78
Hdac1O09106 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac1O09106 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac1O09106 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac1O09106 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac1O09106 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Hdac1O09106 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac1O09106 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.94■□□□□ 0.78
Hdac1O09106 Gm5643-201ENSMUST00000117081 966 ntBASIC19.94■□□□□ 0.78
Hdac1O09106 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.94■□□□□ 0.78
Hdac1O09106 Gm10698-201ENSMUST00000182663 604 ntBASIC19.94■□□□□ 0.78
Hdac1O09106 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac1O09106 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac1O09106 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hdac1O09106 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
Hdac1O09106 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac1O09106 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac1O09106 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac1O09106 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac1O09106 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac1O09106 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac1O09106 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac1O09106 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac1O09106 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac1O09106 Trmt13-210ENSMUST00000198454 880 ntBASIC19.93■□□□□ 0.78
Hdac1O09106 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac1O09106 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac1O09106 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hdac1O09106 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms