Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ebf3O08791 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ebf3O08791 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ebf3O08791 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ebf3O08791 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Ebf3O08791 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ebf3O08791 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ebf3O08791 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ebf3O08791 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ebf3O08791 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ebf3O08791 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ebf3O08791 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ebf3O08791 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ebf3O08791 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ebf3O08791 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ebf3O08791 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ebf3O08791 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Ebf3O08791 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ebf3O08791 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.38■□□□□ 0.37
Ebf3O08791 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ebf3O08791 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.38■□□□□ 0.37
Ebf3O08791 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.38■□□□□ 0.37
Ebf3O08791 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ebf3O08791 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Ebf3O08791 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ebf3O08791 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ebf3O08791 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Ebf3O08791 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ebf3O08791 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ebf3O08791 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Ebf3O08791 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.38■□□□□ 0.37
Ebf3O08791 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.38■□□□□ 0.37
Ebf3O08791 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ebf3O08791 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ebf3O08791 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ebf3O08791 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ebf3O08791 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.37■□□□□ 0.37
Ebf3O08791 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ebf3O08791 Gm27357-201ENSMUST00000183754 135 ntBASIC17.37■□□□□ 0.37
Ebf3O08791 Gm45328-201ENSMUST00000210942 917 ntBASIC17.37■□□□□ 0.37
Ebf3O08791 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.37■□□□□ 0.37
Ebf3O08791 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.37■□□□□ 0.37
Ebf3O08791 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ebf3O08791 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ebf3O08791 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ebf3O08791 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ebf3O08791 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ebf3O08791 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ebf3O08791 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.37■□□□□ 0.37
Ebf3O08791 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ebf3O08791 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ebf3O08791 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Ebf3O08791 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ebf3O08791 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.36■□□□□ 0.37
Ebf3O08791 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf3O08791 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ebf3O08791 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf3O08791 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ebf3O08791 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf3O08791 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf3O08791 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf3O08791 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ebf3O08791 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf3O08791 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf3O08791 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf3O08791 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ebf3O08791 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf3O08791 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf3O08791 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ebf3O08791 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf3O08791 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ebf3O08791 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ebf3O08791 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.35■□□□□ 0.37
Ebf3O08791 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.35■□□□□ 0.37
Ebf3O08791 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ebf3O08791 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ebf3O08791 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.35■□□□□ 0.37
Ebf3O08791 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ebf3O08791 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ebf3O08791 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms