Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Gm14859-201ENSMUST00000117752 357 ntBASIC17.99■□□□□ 0.47
Usp35M0QWN7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.99■□□□□ 0.47
Usp35M0QWN7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.99■□□□□ 0.47
Usp35M0QWN7 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.99■□□□□ 0.47
Usp35M0QWN7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Usp35M0QWN7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.98■□□□□ 0.47
Usp35M0QWN7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp35M0QWN7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp35M0QWN7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp35M0QWN7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.97■□□□□ 0.47
Usp35M0QWN7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp35M0QWN7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Usp35M0QWN7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp35M0QWN7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Usp35M0QWN7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp35M0QWN7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp35M0QWN7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Usp35M0QWN7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.96■□□□□ 0.47
Usp35M0QWN7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp35M0QWN7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp35M0QWN7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.96■□□□□ 0.47
Usp35M0QWN7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Usp35M0QWN7 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.96■□□□□ 0.47
Usp35M0QWN7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp35M0QWN7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.95■□□□□ 0.46
Usp35M0QWN7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Gm7213-201ENSMUST00000215977 950 ntBASIC17.95■□□□□ 0.46
Usp35M0QWN7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Usp35M0QWN7 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.95■□□□□ 0.46
Usp35M0QWN7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Usp35M0QWN7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Usp35M0QWN7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Usp35M0QWN7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
Usp35M0QWN7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Usp35M0QWN7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Usp35M0QWN7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms