Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nkx1-1G3UXB3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Gm6649-201ENSMUST00000199743 1165 ntBASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nkx1-1G3UXB3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Gm26474-201ENSMUST00000116762 122 ntBASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Gm37809-201ENSMUST00000195050 931 ntBASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Gm38170-201ENSMUST00000195404 816 ntBASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Olfr1153-201ENSMUST00000052300 957 ntBASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Nkx1-1G3UXB3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Mir669o-201ENSMUST00000103898 96 ntBASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Gm8679-201ENSMUST00000210651 1036 ntBASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.1■□□□□ 0.65
Nkx1-1G3UXB3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Mir6977-201ENSMUST00000184960 64 ntBASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Gm28766-201ENSMUST00000191086 234 ntBASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Gm29791-202ENSMUST00000207888 369 ntBASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Nkx1-1G3UXB3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nkx1-1G3UXB3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Nkx1-1G3UXB3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nkx1-1G3UXB3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms