Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ccdc188F6WEU2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc188F6WEU2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.93■□□□□ 0.3
Ccdc188F6WEU2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ccdc188F6WEU2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc188F6WEU2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc188F6WEU2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ccdc188F6WEU2 Gm12497-201ENSMUST00000138778 237 ntBASIC16.93■□□□□ 0.3
Ccdc188F6WEU2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc188F6WEU2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc188F6WEU2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Ccdc188F6WEU2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc188F6WEU2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc188F6WEU2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc188F6WEU2 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.93■□□□□ 0.3
Ccdc188F6WEU2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ccdc188F6WEU2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Mir8112-201ENSMUST00000184382 131 ntBASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Gm27494-201ENSMUST00000184735 189 ntBASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ccdc188F6WEU2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Gm25948-201ENSMUST00000175334 112 ntBASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Mir6977-201ENSMUST00000184960 64 ntBASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Gm44335-201ENSMUST00000196879 141 ntBASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Gm44492-201ENSMUST00000197012 141 ntBASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Gm44297-201ENSMUST00000198304 141 ntBASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Gm44346-201ENSMUST00000198851 141 ntBASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ccdc188F6WEU2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Gm11764-201ENSMUST00000120221 623 ntBASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ccdc188F6WEU2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ccdc188F6WEU2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc188F6WEU2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc188F6WEU2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc188F6WEU2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc188F6WEU2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc188F6WEU2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc188F6WEU2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ccdc188F6WEU2 Mir1895-201ENSMUST00000122615 79 ntBASIC16.89■□□□□ 0.29
Ccdc188F6WEU2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms