Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Gm17271-201ENSMUST00000165535 355 ntBASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc85cE9Q6B2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc85cE9Q6B2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc85cE9Q6B2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc85cE9Q6B2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc85cE9Q6B2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Ccdc85cE9Q6B2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc85cE9Q6B2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc85cE9Q6B2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc85cE9Q6B2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc85cE9Q6B2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ccdc85cE9Q6B2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc85cE9Q6B2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc85cE9Q6B2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc85cE9Q6B2 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc85cE9Q6B2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc85cE9Q6B2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 Gm8655-201ENSMUST00000221159 852 ntBASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc85cE9Q6B2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc85cE9Q6B2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc85cE9Q6B2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC20.6■□□□□ 0.89
Ccdc85cE9Q6B2 Gm12497-201ENSMUST00000138778 237 ntBASIC20.6■□□□□ 0.89
Ccdc85cE9Q6B2 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.6■□□□□ 0.89
Ccdc85cE9Q6B2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc85cE9Q6B2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc85cE9Q6B2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms