Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Gm27704-201ENSMUST00000185094 107 ntBASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Gm21362-201ENSMUST00000194272 928 ntBASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdhb9E9Q5G2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb9E9Q5G2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb9E9Q5G2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb9E9Q5G2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb9E9Q5G2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb9E9Q5G2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb9E9Q5G2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Pcdhb9E9Q5G2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdhb9E9Q5G2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.72■□□□□ 0.75
Pcdhb9E9Q5G2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb9E9Q5G2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb9E9Q5G2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb9E9Q5G2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb9E9Q5G2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb9E9Q5G2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb9E9Q5G2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb9E9Q5G2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Gm7284-201ENSMUST00000131667 944 ntBASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Gm7367-201ENSMUST00000057611 492 ntBASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhb9E9Q5G2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb9E9Q5G2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb9E9Q5G2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pcdhb9E9Q5G2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb9E9Q5G2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.69■□□□□ 0.74
Pcdhb9E9Q5G2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb9E9Q5G2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb9E9Q5G2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb9E9Q5G2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb9E9Q5G2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb9E9Q5G2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb9E9Q5G2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb9E9Q5G2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.69■□□□□ 0.74
Pcdhb9E9Q5G2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 Gm45328-201ENSMUST00000210942 917 ntBASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb9E9Q5G2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms