Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Gm14822-201ENSMUST00000122247 291 ntBASIC18.59■□□□□ 0.57
Krt28A6BLY7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Krt28A6BLY7 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.59■□□□□ 0.57
Krt28A6BLY7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Krt28A6BLY7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Krt28A6BLY7 Gm6089-201ENSMUST00000197666 938 ntBASIC18.59■□□□□ 0.57
Krt28A6BLY7 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.59■□□□□ 0.57
Krt28A6BLY7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt28A6BLY7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt28A6BLY7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt28A6BLY7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Krt28A6BLY7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Krt28A6BLY7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Krt28A6BLY7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Krt28A6BLY7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Krt28A6BLY7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt28A6BLY7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.58■□□□□ 0.56
Krt28A6BLY7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Krt28A6BLY7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.58■□□□□ 0.56
Krt28A6BLY7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Krt28A6BLY7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt28A6BLY7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Krt28A6BLY7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt28A6BLY7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Krt28A6BLY7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt28A6BLY7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Krt28A6BLY7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.57■□□□□ 0.56
Krt28A6BLY7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt28A6BLY7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Krt28A6BLY7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Krt28A6BLY7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt28A6BLY7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt28A6BLY7 Gm14140-201ENSMUST00000119999 995 ntBASIC18.57■□□□□ 0.56
Krt28A6BLY7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt28A6BLY7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Krt28A6BLY7 Gm9727-201ENSMUST00000161387 555 ntBASIC18.57■□□□□ 0.56
Krt28A6BLY7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt28A6BLY7 AV026068-213ENSMUST00000223675 1171 ntBASIC18.57■□□□□ 0.56
Krt28A6BLY7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Krt28A6BLY7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt28A6BLY7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt28A6BLY7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Krt28A6BLY7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.57■□□□□ 0.56
Krt28A6BLY7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Krt28A6BLY7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt28A6BLY7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.56■□□□□ 0.56
Krt28A6BLY7 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.56■□□□□ 0.56
Krt28A6BLY7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Krt28A6BLY7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt28A6BLY7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Krt28A6BLY7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Krt28A6BLY7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt28A6BLY7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Krt28A6BLY7 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.55■□□□□ 0.56
Krt28A6BLY7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt28A6BLY7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt28A6BLY7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.55■□□□□ 0.56
Krt28A6BLY7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Krt28A6BLY7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Krt28A6BLY7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
Krt28A6BLY7 Gm7506-201ENSMUST00000207758 815 ntBASIC18.55■□□□□ 0.56
Krt28A6BLY7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt28A6BLY7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt28A6BLY7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Krt28A6BLY7 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.54■□□□□ 0.56
Krt28A6BLY7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt28A6BLY7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.54■□□□□ 0.56
Krt28A6BLY7 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.54■□□□□ 0.56
Krt28A6BLY7 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.54■□□□□ 0.56
Krt28A6BLY7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms