Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Gm27742-201ENSMUST00000184667 60 ntBASIC17.55■□□□□ 0.4
Scn1aA2APX8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Scn1aA2APX8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn1aA2APX8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn1aA2APX8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Scn1aA2APX8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.53■□□□□ 0.4
Scn1aA2APX8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Scn1aA2APX8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn1aA2APX8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Scn1aA2APX8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn1aA2APX8 Gm18669-201ENSMUST00000216049 778 ntBASIC17.52■□□□□ 0.4
Scn1aA2APX8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Scn1aA2APX8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn1aA2APX8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.52■□□□□ 0.4
Scn1aA2APX8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn1aA2APX8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn1aA2APX8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn1aA2APX8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn1aA2APX8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn1aA2APX8 Gm44430-201ENSMUST00000203376 995 ntBASIC17.52■□□□□ 0.39
Scn1aA2APX8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Scn1aA2APX8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn1aA2APX8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn1aA2APX8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Scn1aA2APX8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn1aA2APX8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn1aA2APX8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn1aA2APX8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn1aA2APX8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Scn1aA2APX8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn1aA2APX8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Scn1aA2APX8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.51■□□□□ 0.39
Scn1aA2APX8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn1aA2APX8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn1aA2APX8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Scn1aA2APX8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn1aA2APX8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn1aA2APX8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scn1aA2APX8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scn1aA2APX8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Scn1aA2APX8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn1aA2APX8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn1aA2APX8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.5■□□□□ 0.39
Scn1aA2APX8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn1aA2APX8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn1aA2APX8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn1aA2APX8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn1aA2APX8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.5■□□□□ 0.39
Scn1aA2APX8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn1aA2APX8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms