Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12d-1A0N8R0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Gm12382-201ENSMUST00000122005 922 ntBASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Gm10517-202ENSMUST00000192970 758 ntBASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12d-1A0N8R0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Gm8495-201ENSMUST00000188740 694 ntBASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Gm37292-201ENSMUST00000192062 758 ntBASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Gm37025-201ENSMUST00000195159 829 ntBASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12d-1A0N8R0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12d-1A0N8R0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav12d-1A0N8R0 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-1A0N8R0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-1A0N8R0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-1A0N8R0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-1A0N8R0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-1A0N8R0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav12d-1A0N8R0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-1A0N8R0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-1A0N8R0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-1A0N8R0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-1A0N8R0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-1A0N8R0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-1A0N8R0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav12d-1A0N8R0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12d-1A0N8R0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms