Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Gm20760-201ENSMUST00000179197 648 ntBASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Gm9731-201ENSMUST00000209480 747 ntBASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc194A0A140LIT1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc194A0A140LIT1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Gm12085-201ENSMUST00000119263 940 ntBASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc194A0A140LIT1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc194A0A140LIT1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc194A0A140LIT1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms