Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13n-4A0A0G2JG01 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13n-4A0A0G2JG01 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Gm18959-201ENSMUST00000208954 655 ntBASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Gm10819-201ENSMUST00000099988 561 ntBASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13n-4A0A0G2JG01 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13n-4A0A0G2JG01 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms