Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trbv30A0A0B4J1P1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.66□□□□□ -0.38
Trbv30A0A0B4J1P1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv30A0A0B4J1P1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv30A0A0B4J1P1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv30A0A0B4J1P1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv30A0A0B4J1P1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv30A0A0B4J1P1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv30A0A0B4J1P1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv30A0A0B4J1P1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.66□□□□□ -0.38
Trbv30A0A0B4J1P1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv30A0A0B4J1P1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv30A0A0B4J1P1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv30A0A0B4J1P1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Gm6433-201ENSMUST00000118634 875 ntBASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Gm18959-201ENSMUST00000208954 655 ntBASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv30A0A0B4J1P1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Trbv30A0A0B4J1P1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Mir5130-201ENSMUST00000175160 84 ntBASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm7889-201ENSMUST00000185591 958 ntBASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv30A0A0B4J1P1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trbv30A0A0B4J1P1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm27000-201ENSMUST00000182943 842 ntBASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Mir7071-201ENSMUST00000184847 69 ntBASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Gm45058-201ENSMUST00000205810 766 ntBASIC12.62□□□□□ -0.39
Trbv30A0A0B4J1P1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms