Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trbv3A0A0A6YYE2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trbv3A0A0A6YYE2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv3A0A0A6YYE2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv3A0A0A6YYE2 Flg-201ENSMUST00000050758 1488 ntBASIC12.96□□□□□ -0.34
Trbv3A0A0A6YYE2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv3A0A0A6YYE2 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv3A0A0A6YYE2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Trbv3A0A0A6YYE2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv3A0A0A6YYE2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trbv3A0A0A6YYE2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv3A0A0A6YYE2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.94□□□□□ -0.34
Trbv3A0A0A6YYE2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms