Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-42A0A0A6YY38 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-42A0A0A6YY38 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-42A0A0A6YY38 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
Ighv1-42A0A0A6YY38 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-42A0A0A6YY38 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-42A0A0A6YY38 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.47■□□□□ 0.07
Ighv1-42A0A0A6YY38 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Ighv1-42A0A0A6YY38 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-42A0A0A6YY38 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-42A0A0A6YY38 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ighv1-42A0A0A6YY38 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Gm7461-201ENSMUST00000058918 827 ntBASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ighv1-42A0A0A6YY38 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ighv1-42A0A0A6YY38 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ighv1-42A0A0A6YY38 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ighv1-42A0A0A6YY38 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Ighv1-42A0A0A6YY38 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.46■□□□□ 0.06
Ighv1-42A0A0A6YY38 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ighv1-42A0A0A6YY38 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ighv1-42A0A0A6YY38 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Gm15372-201ENSMUST00000120729 834 ntBASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ighv1-42A0A0A6YY38 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-42A0A0A6YY38 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-42A0A0A6YY38 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ighv1-42A0A0A6YY38 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.43■□□□□ 0.06
Ighv1-42A0A0A6YY38 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-42A0A0A6YY38 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-42A0A0A6YY38 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ighv1-42A0A0A6YY38 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.43■□□□□ 0.06
Ighv1-42A0A0A6YY38 Gm10052-201ENSMUST00000168019 960 ntBASIC15.43■□□□□ 0.06
Ighv1-42A0A0A6YY38 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.43■□□□□ 0.06
Ighv1-42A0A0A6YY38 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-42A0A0A6YY38 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-42A0A0A6YY38 Gm7729-201ENSMUST00000050143 801 ntBASIC15.43■□□□□ 0.06
Ighv1-42A0A0A6YY38 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-42A0A0A6YY38 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv1-42A0A0A6YY38 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms