Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Gm10167-201ENSMUST00000150411 1479 ntBASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav3-4A0A075B654 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav3-4A0A075B654 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav3-4A0A075B654 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav3-4A0A075B654 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
Trav3-4A0A075B654 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav3-4A0A075B654 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav3-4A0A075B654 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms