Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Gm15378-201ENSMUST00000121894 207 ntBASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav9-1A0A075B601 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav9-1A0A075B601 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Gm12085-201ENSMUST00000119263 940 ntBASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Gm10653-202ENSMUST00000139570 835 ntBASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav9-1A0A075B601 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms