Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm37025-201ENSMUST00000195159 829 ntBASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav6-1A0A075B5Z8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm12382-201ENSMUST00000122005 922 ntBASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm42545-201ENSMUST00000202755 922 ntBASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav6-1A0A075B5Z8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm12896-201ENSMUST00000118430 226 ntBASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm10517-202ENSMUST00000192970 758 ntBASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav6-1A0A075B5Z8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6-1A0A075B5Z8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-1A0A075B5Z8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms