Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm7367-201ENSMUST00000057611 492 ntBASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Phf7-203ENSMUST00000226565 1971 ntBASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm21362-201ENSMUST00000194272 928 ntBASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm17808-201ENSMUST00000200859 894 ntBASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav5-1A0A075B5Z7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Mir770-201ENSMUST00000103252 94 ntBASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm29707-201ENSMUST00000196325 491 ntBASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.41□□□□□ -0.1
Trav5-1A0A075B5Z7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm45328-201ENSMUST00000210942 917 ntBASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav5-1A0A075B5Z7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-1A0A075B5Z7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-1A0A075B5Z7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trav5-1A0A075B5Z7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-1A0A075B5Z7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav5-1A0A075B5Z7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav5-1A0A075B5Z7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-1A0A075B5Z7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav5-1A0A075B5Z7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms