Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Speer3W4VSP1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Speer3W4VSP1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Speer3W4VSP1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Speer3W4VSP1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Speer3W4VSP1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Speer3W4VSP1 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.12■□□□□ 0.33
Speer3W4VSP1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Speer3W4VSP1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Speer3W4VSP1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Speer3W4VSP1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.12■□□□□ 0.33
Speer3W4VSP1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Speer3W4VSP1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Gm12527-201ENSMUST00000117967 564 ntBASIC17.11■□□□□ 0.33
Speer3W4VSP1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Speer3W4VSP1 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC17.11■□□□□ 0.33
Speer3W4VSP1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.11■□□□□ 0.33
Speer3W4VSP1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Speer3W4VSP1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Gm13216-201ENSMUST00000117145 591 ntBASIC17.1■□□□□ 0.33
Speer3W4VSP1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.1■□□□□ 0.33
Speer3W4VSP1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.1■□□□□ 0.33
Speer3W4VSP1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Speer3W4VSP1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Speer3W4VSP1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Speer3W4VSP1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Speer3W4VSP1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Speer3W4VSP1 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms