Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smarcb1Q9Z0H3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smarcb1Q9Z0H3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Smarcb1Q9Z0H3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.39■□□□□ 0.38
Smarcb1Q9Z0H3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smarcb1Q9Z0H3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smarcb1Q9Z0H3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smarcb1Q9Z0H3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smarcb1Q9Z0H3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms