Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Gm13216-201ENSMUST00000117145 591 ntBASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn8aQ9WTU3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn8aQ9WTU3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.9■□□□□ 0.3
Scn8aQ9WTU3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.9■□□□□ 0.3
Scn8aQ9WTU3 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.9■□□□□ 0.3
Scn8aQ9WTU3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn8aQ9WTU3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn8aQ9WTU3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn8aQ9WTU3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn8aQ9WTU3 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.9■□□□□ 0.3
Scn8aQ9WTU3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scn8aQ9WTU3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scn8aQ9WTU3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
Scn8aQ9WTU3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scn8aQ9WTU3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Gm27742-201ENSMUST00000184667 60 ntBASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Gm44430-201ENSMUST00000203376 995 ntBASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.88■□□□□ 0.29
Scn8aQ9WTU3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Scn8aQ9WTU3 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.87■□□□□ 0.29
Scn8aQ9WTU3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.87■□□□□ 0.29
Scn8aQ9WTU3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn8aQ9WTU3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn8aQ9WTU3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn8aQ9WTU3 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.87■□□□□ 0.29
Scn8aQ9WTU3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn8aQ9WTU3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.87■□□□□ 0.29
Scn8aQ9WTU3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn8aQ9WTU3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Scn8aQ9WTU3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn8aQ9WTU3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn8aQ9WTU3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Scn8aQ9WTU3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.86■□□□□ 0.29
Scn8aQ9WTU3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms