Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AmfrQ9R049 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AmfrQ9R049 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
AmfrQ9R049 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
AmfrQ9R049 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AmfrQ9R049 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
AmfrQ9R049 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
AmfrQ9R049 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AmfrQ9R049 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.81■□□□□ 0.6
AmfrQ9R049 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.81■□□□□ 0.6
AmfrQ9R049 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AmfrQ9R049 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AmfrQ9R049 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AmfrQ9R049 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AmfrQ9R049 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
AmfrQ9R049 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.81■□□□□ 0.6
AmfrQ9R049 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.81■□□□□ 0.6
AmfrQ9R049 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AmfrQ9R049 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AmfrQ9R049 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AmfrQ9R049 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AmfrQ9R049 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AmfrQ9R049 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
AmfrQ9R049 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AmfrQ9R049 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AmfrQ9R049 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AmfrQ9R049 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
AmfrQ9R049 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
AmfrQ9R049 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
AmfrQ9R049 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
AmfrQ9R049 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
AmfrQ9R049 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
AmfrQ9R049 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
AmfrQ9R049 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AmfrQ9R049 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
AmfrQ9R049 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AmfrQ9R049 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.8■□□□□ 0.6
AmfrQ9R049 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AmfrQ9R049 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AmfrQ9R049 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AmfrQ9R049 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
AmfrQ9R049 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
AmfrQ9R049 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
AmfrQ9R049 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AmfrQ9R049 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.79■□□□□ 0.6
AmfrQ9R049 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AmfrQ9R049 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AmfrQ9R049 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AmfrQ9R049 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AmfrQ9R049 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AmfrQ9R049 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.79■□□□□ 0.6
AmfrQ9R049 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
AmfrQ9R049 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AmfrQ9R049 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AmfrQ9R049 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AmfrQ9R049 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AmfrQ9R049 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
AmfrQ9R049 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AmfrQ9R049 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AmfrQ9R049 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
AmfrQ9R049 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.79■□□□□ 0.6
AmfrQ9R049 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AmfrQ9R049 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.79■□□□□ 0.6
AmfrQ9R049 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AmfrQ9R049 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
AmfrQ9R049 Gm9987-201ENSMUST00000069768 567 ntBASIC18.79■□□□□ 0.6
AmfrQ9R049 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AmfrQ9R049 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.79■□□□□ 0.6
AmfrQ9R049 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AmfrQ9R049 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.79■□□□□ 0.6
AmfrQ9R049 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AmfrQ9R049 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
AmfrQ9R049 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
AmfrQ9R049 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
AmfrQ9R049 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AmfrQ9R049 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
AmfrQ9R049 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.78■□□□□ 0.6
AmfrQ9R049 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
AmfrQ9R049 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AmfrQ9R049 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.78■□□□□ 0.6
AmfrQ9R049 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AmfrQ9R049 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
AmfrQ9R049 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AmfrQ9R049 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AmfrQ9R049 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.78■□□□□ 0.6
AmfrQ9R049 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AmfrQ9R049 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AmfrQ9R049 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AmfrQ9R049 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
AmfrQ9R049 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AmfrQ9R049 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.77■□□□□ 0.6
AmfrQ9R049 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
AmfrQ9R049 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AmfrQ9R049 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
AmfrQ9R049 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.77■□□□□ 0.6
AmfrQ9R049 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AmfrQ9R049 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AmfrQ9R049 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AmfrQ9R049 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
AmfrQ9R049 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms