Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 AA414768-201ENSMUST00000121924 1257 ntBASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rfx5Q9JL61 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Gm9013-201ENSMUST00000132939 882 ntBASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Gm18421-201ENSMUST00000204122 625 ntBASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rfx5Q9JL61 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.73■□□□□ 0.43
Rfx5Q9JL61 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx5Q9JL61 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Mir770-201ENSMUST00000103252 94 ntBASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rfx5Q9JL61 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx5Q9JL61 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx5Q9JL61 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.71■□□□□ 0.43
Rfx5Q9JL61 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms