Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Rbfox1Q9JJ43 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Gm15378-201ENSMUST00000121894 207 ntBASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Gm9731-201ENSMUST00000209480 747 ntBASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rbfox1Q9JJ43 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rbfox1Q9JJ43 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Trmt13-210ENSMUST00000198454 880 ntBASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rbfox1Q9JJ43 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rbfox1Q9JJ43 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rbfox1Q9JJ43 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms