Protein–RNA interactions for Protein: Q9JIG4

Ppp1r3f, Protein phosphatase 1 regulatory subunit 3F, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3fQ9JIG4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Gm17808-201ENSMUST00000200859 894 ntBASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ppp1r3fQ9JIG4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ppp1r3fQ9JIG4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp1r3fQ9JIG4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ppp1r3fQ9JIG4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.3■■□□□ 1
Ppp1r3fQ9JIG4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp1r3fQ9JIG4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp1r3fQ9JIG4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Ppp1r3fQ9JIG4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp1r3fQ9JIG4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp1r3fQ9JIG4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ppp1r3fQ9JIG4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ppp1r3fQ9JIG4 Gm45244-201ENSMUST00000211328 2200 ntBASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Gm24589-201ENSMUST00000116692 94 ntBASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ppp1r3fQ9JIG4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp1r3fQ9JIG4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp1r3fQ9JIG4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp1r3fQ9JIG4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp1r3fQ9JIG4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp1r3fQ9JIG4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ppp1r3fQ9JIG4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.28■■□□□ 1
Ppp1r3fQ9JIG4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ppp1r3fQ9JIG4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ppp1r3fQ9JIG4 Gm27389-201ENSMUST00000183622 195 ntBASIC21.28■■□□□ 1
Ppp1r3fQ9JIG4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ppp1r3fQ9JIG4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp1r3fQ9JIG4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ppp1r3fQ9JIG4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp1r3fQ9JIG4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ppp1r3fQ9JIG4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ppp1r3fQ9JIG4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ppp1r3fQ9JIG4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.27■■□□□ 1
Ppp1r3fQ9JIG4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ppp1r3fQ9JIG4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Ppp1r3fQ9JIG4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.27■■□□□ 1
Ppp1r3fQ9JIG4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ppp1r3fQ9JIG4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ppp1r3fQ9JIG4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ppp1r3fQ9JIG4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ppp1r3fQ9JIG4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ppp1r3fQ9JIG4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ppp1r3fQ9JIG4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ppp1r3fQ9JIG4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Gm18115-201ENSMUST00000221209 621 ntBASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ppp1r3fQ9JIG4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ppp1r3fQ9JIG4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ppp1r3fQ9JIG4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms