Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ssr3Q9DCF9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ssr3Q9DCF9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ssr3Q9DCF9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ssr3Q9DCF9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
Ssr3Q9DCF9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ssr3Q9DCF9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Ssr3Q9DCF9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ssr3Q9DCF9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ssr3Q9DCF9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr3Q9DCF9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Gm38285-201ENSMUST00000192928 922 ntBASIC15.07■□□□□ 0
Ssr3Q9DCF9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ssr3Q9DCF9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms